Package: speedytax 1.0.4.9000

speedytax: Rapidly Import Classifier Results into 'phyloseq'

Import classification results from the 'RDP Classifier' (Ribosomal Database Project),' 'USEARCH sintax,' 'vsearch sintax' and the 'QIIME2' (Quantitative Insights into Microbial Ecology) classifiers into 'phyloseq' tax_table objects.

Authors:John Quensen [aut, cre, cph]

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NEWS

Peer review:

Bug tracker:https://github.com/jfq3/speedytax/issues

On CRAN:

5 exports 0.92 score 78 dependencies 3 scripts 132 downloads

Last updated 4 months agofrom:dc3168e775. Checks:OK: 9. Indexed: yes.

Exports:import_qiime2_tax_tableimport_rdp_tax_tableimport_sintax_tax_tableread_tax_examplesimple_cap

Dependencies:ade4apeaskpassBiobaseBiocGenericsbiomformatBiostringscliclustercodetoolscolorspacecpp11crayoncurldata.tabledigestdplyrfansifarverforeachgenericsGenomeInfoDbGenomeInfoDbDataggplot2gluegtablehttrigraphIRangesisobanditeratorsjsonlitelabelinglatticelifecyclemagrittrMASSMatrixmgcvmimemulttestmunsellnlmeopensslpermutephyloseqpillarpixmappkgconfigplyrpurrrR6RColorBrewerRcppRcppArmadilloreshape2rhdf5rhdf5filtersRhdf5librlangS4VectorsscalesspstringistringrsurvivalsystibbletidyrtidyselectUCSC.utilsutf8vctrsveganviridisLitewithrXVectorzlibbioc